Bioinformatics companies
Develops software for the
analysis and management of microarray data.
Provider of discovery
research software & services to pharmaceutical, biotechnology, & other
life sciences companies worldwide.
Offers instrument-based
software for the discovery, development, and manufacturing of drugs.
Microfluidics arrays
("lab-on-a-chip") for high-throughput pharmaceutical drug screening,
multiplexed gene expression analysis, and multiplexed SNP genotyping.
Offers microarray
bioinformatics software and services.
Expediting lead discovery by
providing structural data and analysis for drug targets.
Provides to the
pharmaceutical, diagnostic and biotech industry full range of post-genomic
services : HT SNP discovery and genotyping, and functional proteomics.
Provides online, as well as
on-site, tools for protein sequence analysis and structure prediction. Focused
on the relationship between the amino acid sequence of proteins and their
function.
Develops software systems for
the acquisition, management and analysis of molecular biology data and
information.
Informational genomics - the
integration of bioinformatics with genomics tools to accelerate and improve the
drug discovery process. Providing an economical, reliable, and flexible technology
for pharmaceutical, biotechnology and agricultural companies.
Provides statistical
consulting and specialised software development services to the biotechnology
industry.
Consulting in gene product
analysis, including structure-based sequence alignment, homology modeling, and
x-ray crystallography.
Molecular database
technologies. To-Oracle database conversions. Data-mining and eCommerce
development for genomics and proteomics.
Provides microarray and gene
expression data analysis.
Software company providing
integrated molecular database technologies for life science research. NB:
control to see site in English is at lower right
Bioinformatics/genomics
consultancy with expertise in comparative genomics and model organisms for
target development and biological understanding.
Company developing human
monoclonal antibodies as novel therapeutics. Also applying its technology
platform to functional genomics to assist the discovery of new drug targets.
Front-line and back-end
bio-database development services for bioinformatics projects: design and
maintenance of public sequence repositories, commercial data mining
applications of molecular biology databases, automated data mirroring, database
conversion.
With our DeCypher
Bioinformatics Accelerator, TimeLogic speeds genomic discovery for
biotechnology and pharmaceutical companies. DeCypher dramatically accelerates
computationally intensive algorithms, including BLAST, Smith-Waterman and HMM
analysis.
Specializes in epitope
prediction and protein analysis for proteomics, diagnostics, therapeutics, life
science research, and antibody production.
Provides bioinformatics
software in Canada for laboratory information management systems (lims),
sequence analysis, microarray expression analysis, and proteomics (1d and 2d
gel image analysis).
Specializing in software for
the analysis of microarray data (GeneTraffic).
Software and services for
reverse engineering and modeling of biochemical pathways for drug target
discovery and validation projects related to inflammatory diseases.
Genomatica,
Inc. - Home of the Genetic Circuits Simulation System --- ( http://www.genomatica.com/ )
A leading innovator of in
silico systems biology, building proprietary cellular-level models to
accelerate the identification & production of more effective drugs,
chemical & agricultural products, & enabling in-silico biological
discovery.
Software for biological
pathways visualization and analysis, functional interpretation of genetic
information.
Offers iOligo software which
designs oligonucleotides for PCR or sequencing reactions, and orders them
directly from synthesis companies.
Our bioinformatics
consulting, systems development, and integration services help ensure your
bioinformatics systems are fully geared toward your success and unique
strategies. We focus on deploying the best technologies for today while working
on the best technologies for tomorrow.
provides custom Excel
programming services for drug discovery applications.
Products and services for
bioanalytical data analysis.
Mascot, the on-line search
engine for protein identification using mass spectrometry data
Discovery Partners
International is the premier provider of technology, products and services that
augment the drug discovery efforts of the pharmaceutical industry.
DNA primer and probe
synthesis and diagnostic PCR assay design.
Discovery informatics company
for life sciences and chemistry. Makers of Assay Explorer software to track and
datamine imaging based experiments.
(now Insightful) is developer
of S-PLUS, excellent statistical data mining software. Insightful provides many
other data analysis tools.
Do fast track experiments
online for gene analysis, homology analysis for fingerprinting, agarose gel
image comparison applications
GeneScape Portal promoting
CuraTools, an integrated suite of bioinformatics tools for easy analyses on
collections of sequences.
Produces DNA secondary
structure prediction software including alignments and Chous-Fasman analysis.
Geospiza's bioinformatics
software helps service, research, and clinical laboratories manage and analyze
data from genomics, DNA sequencing, genotyping and proteomics.
makers of Delta2D, software
for difference analysis of 2D electrophoresis gels.
Supplier of bioinformatics
software for gene and protein sequence analysis, high-throughput screening
systems and databases for managing bioassay information. Formerly Oxford
Molecular, Genetics Computer Group (GCG), Molecular Simulations Inc. (MSI), and
Synopsys Scientific Systems.
Provides crystallography
services and recombinant protein production by means of Semliki Forest Virus.
Bioinformatics tools for
visualization and analysis of gene expression data, allowing scientists to
extract knowledge for drug discovery and gene function identification.
Develops software analysis
tools for mass spectrometry-based proteomics and microarray-based image
processing.
Provides software tools to
accelerate the research process: GeneTool for DNA sequence analysis, PepTool
for protein sequence analysis, and ChromaTool for DNA sequence assembly.
Provides software for
visualization, analysis and classification of gene expression and proteomics
data.
Myriad's ProNet program is
designed to rapidly identify large numbers of novel protein-protein
interactions.
geneticXchange provides the
only open system Data Integration Platform to help accelerate the drug
discovery process for biotech and pharmaceutical companies.
A biotechnology company that
is combining ecology and bioinformatics to directly discover novel genes in
nature. Currently focussing on thermophiles.
Provides proteomics-based
drug discovery and development and identification of proteins directly
associated with diseases.
Professional algorithmic and
software solutions for the bioinformatics industry: PROSPECT for protein
structure prediction, PatternHunter for identifying all approximate repeats in
a complete genome, and COPIA for discovering motifs in a family of protein
sequences.
Supplier of Clustering and
Data Visualization software to the Life and Chemical Sciences industries.
The Institute for
Computational Genomics (INCOGEN) focuses on computational and data management
solutions to the complex challenges faced by researchers in plant and animal
genomics.
Strand
Genomics:Life science informatics company - Algorithms for life --- ( http://www.strandgenomics.com )
Develops softwares (avadis,
acuris ) for analysis of gene expression, and proteomics data for drug
discovery and development.
Provides software solutions
designed to accelerate life science research using advanced genomic data
analysis technology.
Metahelix Life Sciences is a
company that specializes in scientific consulting, contract research,
application software and product development in the emerging areas of life
science informatics and genomics.
Offers microarray products to
further dermatology research. Webpage has information on techniques used to
analyze proteins.
Applies genomics and
informatics technologies to improve drug development, pharmaceutical marketing
and prescription medication.
Provides market research to
clients in the biotechnology, medical, and pharmaceutical industry.
Developers of the Biopendium,
a resource of protein structure and function information that enables
identification of distantly related proteins and thus exploration of the human
proteome.
Provides gene expression and
protein localization database aimed at drug-discovery programs. Also offers
target validation by selection and prioritization.
Java software development and
consulting for the bioinformatics industry.
Supplier of DNA and protein
sequence analysis software.
Designs tools for comparative
genomic data analysis, data integration, and visualization for genomic and
protein data.
Project development services
for life science software projects.
A Pointer to Proteomics
Research Resources! ProteomicsSURF, a meta directory, is dedicated to provide
web information on proteomics methods & protocols for both novice and
advanced users by pointing appropriate 'directories' that list relevant and
useful resources.
Develops scientific software
for proteomics, genomics, drug discovery and bioinformatics. Products include
Phoretix, Progenesis and Progenera.
Provider of software
solutions to meet the needs of researchers seeking to extract information from
genome sequencing projects and DNA microarray screening. Free access to SeqIt,
an on-line protein database mining program.
A company developing targeted
gene replacement and modification technology.
Hitachi Genetic Systems, by
MiraiBio Inc, offers quality instruments, software, consumables and supporting
applications for the genetics/molecular biology laboratory.
Biological information
technology company providing integrated solutions for genomics and
bioinformatics to the life science industry.
Develops tools for microarray
data analysis and text-mining from scientific texts.
Gene-IT - High
Performance Bioinformatics Software for Sequence Data Mining --- ( http://www.gene-it.com )
Gene-IT is a bioinformatics
company that provides life-science research organizations with scalable high
performance software and scientific expertise for biological sequence data
mining.
Develops web-based software
for the visualization and analysis of biological signaling pathways for drug
discovery and development.
Specializes in the
data-mining, discovery, interpretation and management of biological data.
Canadian company providing
binformatics and knowledge management solutions for life science researchers.
Consulting by mathematical
models for biological and ecological problems.
Biological databases,
bioinformatics tools, and consulting in gene regulatory processes such as
transcriptional control and signal transduction.
Provides customizable
software solutions and related scientific services for the analysis of genomics
and proteomics data.
Provides software consulting
services to early-stage biotechnology ventures.
Developing bioinformatics
software for sequence analysis, sequence based predictions, and biological
pathway analysis and visualization.
Web-based resource of
information on gene function, proteomic pathways, and reagent exchange. Forum
for information exchange and collaboration between researchers.
Provides bio imaging systems,
gel documentation systems and gel analysis software for UV, white light,
chemiluminescence, fluorescence applications.
Human animal proteome
research, consulting and database. Searching for the proteome of birth, growth,
aging and disease using proteomics tools, 2D and mass spectrometry. Bilingual
but some English pages include Korean text.
LabVantage Solutions is a
global provider of workflow driven automation tools, knowledge management
software, implementation services, and consulting to leading
discovery-oriented, high throughput screening, genomics, proteomics,
pharmaceuticals, and combinatorial chemistry companies.
Explores and designs
metabolic pathways.
Contract R&D services in
bioinformatics, LIMS, genomics, and proteomics for the biotech and pharma
industries.
Consulting group specializing
in training, marketing, and testing.
Providing integrated
information management solutions for the life sciences.
Helping industry adapt
quickly to, and maximise benefits from, developments in the fast-growing fields
of bioinformatics, computational biology, and information technology in general
- from the European Bioinformatics Inst.
Genomics, proteomics,
combinatorial chemistry, computational science and machine learning for drug
discovery.
The Intelligent Molecular
Object (IMO) Platform adds speed and efficiency to global data access and
integrated analysis. Also: applications integration, automated new applications
assembly, ISO9000/FDA/CDER/CFIR validation, distributed computing.
Offers annotated genome
database, and DNA and protein sequence analysis tools.
Develops and markets
platforms, tools and products that accelerate post-genomic research, the
advanced study of proteins and protein pathways, and drug target discovery.
Tools for distant homology
search, protein folding, phylogeny, motif finding, alignment, proteomics
database and mining
BioPharmaceutical software
for functional genomics, gene discovery, and positional cloning; using genetic
analysis, physical mapping, and sequence analysis.
Provides XML-powered Internet
solutions and bioinformatics applications for the life science researcher to
access, data mine, integrate, store, and visualize biomedical information.
InforMax's solutions combine
molecular biology techniques, information technology and Internet
communications to automate the research process, facilitating high-speed
analysis and dramatically increasing productivity.
Offering human, mouse and
drosophila genome databases, a View&Search program and advanced products in
development. Services include converting custom databases and adding special
features.
Company focusing on
"more efficient and accurate bioinformatic analysis of complex
carbohydrates and their interactions".
Develops bioinformatics
software for molecular visualization, sequence analysis, information and data
integration, and organization and management systems.
Bioinformatics company
specialising in molecular modeling.
InnaPhase provides innovative
desktop and enterprise technology solutions for early drug development teams.
Offers custom software
development for gene and protein sequence analysis, and drug discovery.
Provides software products
and consulting services for the processing and analysis of gene expression
data.
Provides consulting on
nucleic acid thermodynamics and OMP, the Oligonucleotide Modeling Platform, a
software framework for building applications to design multiplex PCR primers,
probes and DNA microarrays.
Application of advanced
statistical methods to the information bottlenecks in drug discovery.
Provides proteomics,
metabolomics, and systems biology software for mass spectrometry data.
Insilico provides data
centered bioinformatic tools for life science and pharma.
Provides protein sequence and
structure based bioinformatics tools for the pharmaceutical and biotech
industries.
Distributes structural
bioinformatics software and educational material.
Offers products and services
in functional genomics of gene regulation.
Companies in the
Bioinformatics Software and Software-Related Services Sector
Technology Area |
Company Name |
Headquarters |
Company
website |
DNA/Protein Sequence Analysis |
Allometra |
Davis, Calif. |
www.allometra.com/ |
|
|
Edinburgh, Scotland, UK |
www.anedabio.com/ |
|
Apocom |
Knoxville, Tenn. |
www.apocom.com |
|
Bioinformatics Solutions |
Waterloo, Ontario, Canada |
www.bioinformaticssolutions.com/ |
|
BioMax Informatics |
Martinsried, Germany |
www.biomax.de |
|
BioTools |
Edmonton, Alberta, Canada |
www.biotools.com |
|
DNAStar |
Madison, Wisc. |
www.dnastar.com |
|
DNAtools |
Fort Collins, Colo. |
www.dnatools.com |
|
Gene Codes |
Ann Arbor, Mich. |
www.genecodes.com |
|
Gene-IT |
Paris, France |
www.gene-it.com |
|
GeneStudio |
Suwannee, Ga. |
www.genestudio.com |
|
Genomatix Software |
Munich, Germany |
www.genomatix.de |
|
Genometrician |
Saint-Sulpice, Switzerland |
www.genometrician.com |
|
Genomix |
Oak Ridge, Tenn. |
www.genomix.com |
|
Geospiza |
Seattle, Wash. |
www.geospiza.com |
|
MiraiBio |
Alameda, Calif. |
www.miraibio.com |
|
Ocimum Biosolutions |
Hyderabad, India |
www.ocimumbio.com |
|
Paracel |
Pasadena, Calif. |
www.paracel.com |
|
Redasoft |
Bradford, Ontario, Canada |
www.redasoft.com |
|
Rescentris |
Columbus, Ohio |
www.rescentris.com |
|
Scinova Informatics |
Mumbai, India |
www.scinovaindia.com |
|
Softberry |
Mount Kisco, NY |
www.softberry.com |
|
TimeLogic |
Carlsbad, Calif. |
www.timelogic.com |
|
Textco BioSoftware |
West Lebanon, NH |
www.textco.com |
Microarray/Gene Expression Analysis |
Aber Genomic Computing |
Aberystwyth, Wales, UK |
www.abergc.com/ |
|
Alma Bioinformatics |
Madrid, Spain |
www.almabioinfo.com |
|
Amersham Biosciences Niagara (formerly Imaging
Reseearch) |
St. Catherines, Ontario, Canada |
www.imagingresearch.com/ |
|
BioDiscovery |
El Segundo, Calif. |
www.biodiscovery.com |
|
BioMind |
Bethesda, Md. |
www.biomind.com |
|
Chang Bioscience |
Castro Valley, Calif. |
www.changbioscience.com |
|
Corimbia |
Berkeley, Calif. |
www.corimbia.com/ |
|
Genedata |
Basel, Switzerland |
www.genedata.com/ |
|
Insightful (life science business) |
Seattle, Wash. |
www.insightful.com/industry/pharm/default.asp |
|
Iobion Informatics (affiliate of Stratagene) |
La Jolla, Calif. |
www.iobion.com |
|
Koada Technology |
Glasgow, Scotland, UK |
www.koada.com |
|
MicroDiscovery |
Berlin, Germany |
www.microdiscovery.de |
|
MolecularWare (subsidiary of Calbatech) |
Cambridge, Mass. |
www.molecularware.com/ |
|
MolMine |
Bergen, Norway |
www.molmine.com |
|
OmniViz |
Maynard, Mass. |
www.omniviz.com |
|
Partek |
St. Charles, Mo. |
www.partek.com |
|
Predictive Patterns |
Kingston, Ontario, Canada |
www.predictivepatterns.com |
|
Rosetta Biosoftware |
Seattle, Wash. |
www.rosettabio.com/ |
|
SAS |
Cary, NC |
www.sas.com/industry/pharma/ |
|
Silicon Genetics |
Redwood City, Calif. |
www.silicongenetics.com/cgi/SiG.cgi/index.smf |
|
Spotfire |
Somerville, Mass. |
www.spotfire.com |
|
SPSS (life science group) |
Chicago, Ill. |
www.spss.com/applications/science/ |
|
Strand Genomics |
Bangalore, India |
www.strandgenomics.com |
|
TG Services |
El Sobrante, Calif. |
www.genepilot.com/index.html |
|
ViaLogy |
Altadena, Calif. |
www.vialogy.com |
|
VizX Labs |
Seattle, Wash. |
www.vizxlabs.com/index.html |
Proteomics (Mass Spec, 2D Gel Analysis) |
Decodon |
Greifswald, Germany |
www.decodon.com |
|
Geneva Bioinformatics |
Geneva, Switzerland |
www.genebio.com/ |
|
Genomic Solutions (subsidiary of Harvard Biosciences) |
Ann Arbor, Mich. |
http://65.219.84.5/index.html |
|
Imaxia |
Cupertino, Calif. |
www.imaxia.com |
|
Matrix Science |
London, UK |
www.matrixscience.com/ |
|
Nonlinear Dynamics |
Newcastle upon Tyne, UK |
www.nonlinear.com |
Structural Proteomics |
Eidogen |
Pasadena, Calif. |
www.eidogen.com/ |
|
Epitope Informatics |
Edmundbyers (near Durham), UK |
www.epitope-informatics.com |
|
Molsoft |
San Diego, Calif. |
www.molsoft.com |
|
RedStorm Scientific |
Houston, Texas |
|
|
Proceryon Biosciences |
Salzburg, Austria |
|
|
Protein Mechanics |
Mountain View, Calif. |
|
Pathway Analysis |
Ariadne Genomics |
Rockville, Md. |
www.ariadnegenomics.com/index.html |
|
GeneGo |
St. Joseph, Mich. |
|
|
Hippron Physiomics |
Ottawa, Canada |
|
|
Ingenuity Systems |
Mountain View, Calif. |
|
|
Jubilant Biosys |
Bangalore, India |
www.jubilantbiosys.com/ |
|
Silico Insights |
Woburn, Mass. |
silicoinsights.com/index.html |
Genetic Variation Analysis |
Ananomouse |
San Francisco, Calif. |
|
|
Biodata |
Tartu, Estonia |
|
|
Forensic Bioinformatic Services |
Fairborn, Ohio |
|
|
Golden Helix |
Bozeman, Montana |
www.goldenhelix.com/index.jsp |
|
SoftGenetics |
State College, Penn. |
www.softgenetics.com/ |
|
Visualize (life science group) |
Phoenix, Az. |
|
Cellular Simulation |
BioAnalytics Group |
Hightstown, NJ |
www.bioanalyticsgroup.com/default.htm |
|
Cellicon Biotechnologies |
Boston, Mass. |
www.puretechventures.com/portfolio/cellicon/?section=ventures |
|
Entelos |
Foster City, Calif. |
www.entelos.com/ |
|
Gene Network Sciences |
Ithaca, NY |
www.gnsbiotech.com//index.php |
|
Genomatica |
San Diego, Calif. |
www.genomatica.com/index1.html |
|
Teranode |
Seattle, Wash. |
www.teranode.com/ |
Ontologies |
BioWisdom |
Cambridge, UK |
www.biowisdom.com/ |
|
Electric Genetics |
Cape Town, South Africa |
www.egenetics.com/index.html |
Text Mining |
Axontologic |
Orlando, Fl. |
www.axontologic.com/ |
|
Definiens |
Munich, Germany |
|
|
eTexx |
Irving, Texas |
www.etexxbio.com/ |
|
InPharmix |
Greenwood, Ind. |
www.inpharmix.com/ |
|
Molecular Connections |
Bangalore, India |
www.molecularconnections.com/website/ |
|
PubGene |
Oslo, Norway |
www.pubgene.com/ |
|
Reel Two |
San Francisco, Calif. |
www.reeltwo.com/ |
|
SemanTx Life Sciences (subsidiary of Jarg) |
Waltham, Mass. |
www.semantxls.com/ |
Workflow/Pipelining |
Incogen |
Williamsburg, Va. |
www.incogen.com/ |
|
Inforsense |
London, UK |
www.inforsense.com/ |
|
KooPrime |
Singapore |
www.kooprime.com/webpage.htm |
|
SciTegic |
San Diego, Calif. |
|
|
TurboWorx |
Burlington, Mass. |
www.turbogenomics.com/ |
Integration |
GeneticXchange |
Menlo Park, Calif. |
www.geneticxchange.com/v3/index.php |
|
Genomining |
Montrouge, France |
www.genomining.com/home.en.html |
|
IO Informatics |
Emeryville, Calif. |
www.io-informatics.com/ |
Multiple Products |
Accelrys |
San Diego, Calif. |
www.accelrys.com/ |
|
Applied Maths |
Sint-Martens-Latem, Belgium |
www.applied-maths.com/ |
|
Compugen |
Tel Aviv, Israel |
www.cgen.com/ |
|
InforMax (Invitrogen subsidiary) |
Frederick, Md. |
www.informaxinc.com/content.cfm?pageid=1 |
|
Lion Bioscience |
Heidelberg, Germany |
www.lionbioscience.com/ |
|
|
|
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